Arabidopsis thaliana protein interaction network
Laboratório de Biologia Molecular de Plantas
Find locus: show subcellular location show Ontology

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To have the most pleasant experience with AtPIN please read the following

You must indicate one locus to search for. If you don't have any in mind now and want to use AtPIN, try this demo by clicking here (AT3G19270)

All database searches will be performed over the locus you entered, the resulting PPIs will be classified according to their detection evidence and AtPIN classes

To visualize the generated network you should export your search as XGMML or SIF file and use Cytoscape.

The results page will include the SUBA location of all interaction proteins as well the TAIR gene ontologies and annotations and descriptions.

The interactions database includes all interactions present at the Arabidopsis thaliana Protein Interactome Database, the Predicted Interactome for Arabidopsis, Arabidopsis protein-protein interaction data curated from the literature by TAIR curators, BIOGRID and IntAct

If you have any question please write to mbrandao [at symbol] esalq.usp.br.

If you find AtPIN interesting and want to use it in your work please cite us:

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Some statistics

RELEASE: 10

Number of interactions: 96827

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Database statistics

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